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2008

Alas A., Öktener A., Iscimen A., Trilles J.-P (2008). New host record Parablennius sanguinolentus (Teleostei, Perciformes, Blenniidae) for Nerocila bivittata (Crustacea, Isopoda, Cymothoidae). Parasitology Research 102 : 645-646.

Anger K., Torres G., Charmantier-Daures M., Charmantier G. (2008). Adaptive diversity in congeneric coastal crabs: ontogenetic patterns of osmoregulation match life-history strategies in Armases spp (Decapoda, Sesarmidae). Journal of Experimental Marine Biology and Ecology 367: 28-36.

Bariche M., Trilles J.-P. (2008). Ceratothoa collaris (Isopoda, Cymothoidae) new to the Eastern Mediterranean Sea, with comments on its distribution and host specificity. Journal of the Marine Biological Association of the United Kingdom 88: 85-93.

Bec B., Collos Y., Vaquer A., Mouillot D., Souchu P. (2008). Growth rate peaks at intermediate cell size in marine photosynthetic picoeukaryotes. Limnology and  Oceanography 53: 863-867.

Bersch B., Favier A., Schanda P., Van Aelst S., Vallaeys T., Coves J., Mergeay M., Wattiez R. (2008). Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge. Journal of Molecular Biology 380(2): 386-403.

Berthet N., Filliol I., Dickinson P, Vallaeys T., Kong KA., Zhang S., Xing G., Turpaz Y., Reinhardt RA., Manuguerra J-C, Old I.G, Cole S.T, Kennedy G.C. (2008). Massively parallel pathogen identification using high-density microarrays. Microbial Biotechnology 1(1): 79-86.

Bettarel Y., Arfi R., Bouvier T., Bouvy M., Briand E., Colombet J., Corbin D., Sime-Ngando T. (2008). Virioplankton distribution and activity in a tropical eutrophicated Bay. Estuarine Coastal and Shelf Science 80: 425-429.

Bonilla-Findji O, Malits A, Lefevre D, Rochelle-Newall E, Lemee R, Weinbauer MG, Gattuso JP (2008) Viral effects on bacterial respiration, production and growth efficiency: Consistent trends in the Southern Ocean and the Mediterranean Sea. Deep-Sea Research Part II-Topical Studies in Oceanography 55:790-800.

Bouvy M., Briand E., Boup M.M., Got P., Leboulanger C., Bettarel Y., Arfi Y. (2008). Effects of sewage discharges on microbial components in tropical coastal waters (Senegal, West Africa). Marine and Freshwater Research 59: 614-626.

Brehelin M., Roch Ph. (2008). Specificity, learning and memory in the innate immune response. Invertebrate Survival Journal 5: 103-109.

Catherine A., Quiblier C., Yéprémian C., Got P., Groleau A., Vinçon-Leite B., Bernard C., Troussellier M. (2008). Collapse of a Planktothrix agardhii perennial bloom and microcystin dynamics in response to reduced phosphate concentrations in a temperate lake. FEMS Microbiology and Ecology 65 : 61-73.

Catherine A., Troussellier M., Bernard C. (2008). Design and application of a stratified sampling strategy to study the regional distribution of cyanobacteria (Ile-de-France, France). Water Research 42: 4989-5001.

Cissoko M., Desnues A., Bouvy M., Sime-Ngando T., Verling E., Bettarel Y. (2008). Effects of freshwater and seawater mixing on virio- and bacterioplankton in a tropical estuary. Freshwater Biology 53: 1154-116.

Conan P., Joux F., Torréton J-P., Pujo-Pay M., Rochelle-Newall E., Mari X. (2008). Impact of solar ultraviolet radiation on bacterio- and phytoplankton activity in a large coral reef lagoon (SW New Caledonia). June 2007. Aquatic Microbial Ecology 52: 83-98.

Cuadrado M., Marques A., Diamant A., Sitja-Bobadilla A, Palenzuela O., Alvarez-Ellitero P., Francesc Padro F., Silvia Crespo S. (2008). Ultrastructure of Enteromyxum leei (Myxozoa), an Enteric Parasite Infecting Gilthead Sea Bream (Sparus aurata) and Sharpsnout Sea Bream (Diplodus puntazzo). Journal of Eukaryotes Microbiology 55(3):178-184.

De Beer D. Bissett A., de Wit R., Jonkers H., Köhler-Rink S., Nam H., Hyo Kim B., Eickert G., Grinstain M. (2008). A microsensor for carbonate ions suitable for microprofiling in freshwater and saline environments. Limnology and Oceanography Methods 6 : 532-541.

De Lorgeril J., Gueguen Y., Goarant C., Goyard E., Mugnier C., Fievet J., Piquemal D., Bachère E. (2008). A relationship between antimicrobial peptide gene expression and capacity of a selected shrimp line to survive a Vibrio infection. Molecular Immunology 45(12): 3438-3445.

De Wit R. (2008). Microbial diversity in the Bassin d'Arcachon coastal lagoon (SW France). Hydrobiologia 614: 5-15.

Dorigo U., Lefranc M., Leboulanger C., Montuelle B., Humbert JF. (2008). Spatial heterogeneity of periphytic microbial communities in a small river polluted by pesticides. FEMS Microbiol Ecology 67: 491-501.

Felten V., Charmantier G., Charmantier-Daures M., Aujoulat F., Geffard O., Garric J. (2008). Physiological and behavioural responses of Gammarus pulex exposed to acid stress. Comparative Biochemistry and Physiology part- C 147: 189-197.

Felten V., Charmantier G., Mons R., Geffard A., Rousselle P., Coquery M., Garric J., Geffard O. (2008). Physiological and behavioural responses of Gammarus pulex (Crustacea Amphipoda) exposed to Cadmium. Aquatic Toxicology 86: 413-425.

Fleurance R.., Sauvegrain C., Marques A., Le BretonA., Guereaud C., Cherel Y., Wyers M. (2008). Histological changes caused by Enteromyxum leei infection in farmed sea  brean Sparus aurata. Diseases Aquatic Organims 79: 219-228.

Fraser S.E.M., Dytham C., Mayhew P.J., Mouillot D., Anderson B.J. (2008). Community structure in ichneumonid parasitoids at different spatial scales. Oecologia 157:521-530.

Gestal C., Roch Ph., Renault T., Pallavicini A., Paillard C., Novoa B., Oubella R., Venier P., Figueras A. (2008). Study of diseases and the immune system of bivalves using molecular biology and genomics. Reviews Fisheries Science 16:131-154.

Giffard-Mena I., Lorin-Nebel C., Charmantier G., Castille R., Boulo V. (2008). Adaptation of the sea-bass (Dicentrarchus labrax) to fresh water: role of Aquaporins and Na+/K+-ATPases. Comparative Biochemistry and Physiology part- A 150: 332-338.

Glibert P.M., Azanza R., Burford M., Furuya K., Abal E., Al-Azri A., Al-Yamani F.,  Andersen P., Beardall J., Berg G.M., Brand L., Bronk D., Brookes J., Burkholder J.M.,  Cembella A., Cochlan W.P., Collier J., Collos Y., Diaz R., Doblin M., Drennen T.,  Dyhrman S., Fukuyo Y., Furnas M., Galloway J., Granéli E., Ha D.V. Hallegraeff G.,  Harrison J., Harrison P.J., Heil C.A., Heimann K., Howarth R., Jauzein C., Kana A.A.,  Kana T.M., Kim H., Kudela R., Legrand C., Mallin M., Mulholland M., Murray S., O'Neil J., Pitcher G., Qi Y., Rabalais N., Raine R., Seitzinger S., Solomon C., Stoecker D.A., Usup G., Wilson J., Yin K., Zhou M., Zhu M. (2008). Ocean urea fertilization for carbon credits poses high ecological risks. Marine Pollution Bulletin 56: 1049-1056.

Guéguen M., Lassus P., Laabir M., Bardouil M., Baron R., Séchet V., Truquet P., Amzil Z. (2008). Gut passage times in two bivalve molluscs fed toxic microalgae: Alexandrium minutum, A. catenella and Pseudo-nitzschia calliantha. Aquatic Living Ressources 21: 21-29.
Guilhaumon F., Gimenez O., Gaston K.J., Mouillot D. (2008). Taxonomic and regional uncertainty in species-area relationships and the identification of richness hotspots. Proceedings of the National Academy of Sciences of the United States of America 105: 15458-15463.

Guinand B., Rolland JL., Bonhomme F (2008). Genetic structure of the common sole (Solea solea) in the Bay of Biscay: nurseries as units of selection? Estuarine Coastal and Shelf Science. 78 : 316-326.

Jauzein C., Collos Y., Garcés E., Vila M., Maso M. (2008). Short-term temporal variability of ammonium and urea uptake by Alexandrium catenella (Dinophyta) in cultures. Journal of Phycology 44 (5): 1136-1145.

Jauzein, C., Loureiro, S., Garcés, E., Collos, Y. (2008). Interactions between ammonium and urea uptake by 5 strains of Alexandrium catenella (Dinophyta) in cultures. Aquatic Microbial Ecology 53: 271-280.

Knief C., Frances L., Cantet F., Vorholt J. (2008). Cultivation-independent characterization of Methylobacterium populations in the plant phyllosphere by automated ribosomal intergenic spacer analysis (ARISA). Applied and Environmental Microbiology 74: 2218-2228.

Krasnov B.R. Korallo-Vinarskaya M.V., Vinarski M.V., Shenbrot G.I., Mouillot D., Poulin R. (2008). Searching for general patterns in parasite ecology: Host identity vs. environmental influence on gamasid mite assemblages in small mammals. Parasitology 135: 229-242.

Krasnov B.R., Mouillot D., Khokhlova I.S., Shenbrot G.I., Poulin R. (2008). Scale-invariance of niche breadth in haematophagous ectoparasites. Ecography 31: 630-635.

Krasnov B.R., Shenbrot G.I., Khokhlova I.S., Mouillot D., Poulin R. (2008). Latitudinal gradient in niche breadth: empirical evidence from haematophagous ectoparasites. Journal of Biogeography 35: 592-601.

Lasram F.B.R., Tomasini J.A., Romdhane M.S., Do Chi T., Mouillot D. (2008). Ecological correlates of colonization success in Lessepsian fishes. Marine Ecology Progress Series 363: 273-286.

Lasram F.B.R., Tomasini J.A., Romdhane M.S., Do Chi T., Mouillot D. (2008). Historical colonization of the Mediterranean Sea by Atlantic fishes: do biological traits matter? Hydrobiologia 607: 51-62.

Li H., Parisi M-G., Toubiana M., Cammarata M., Roch Ph. (2008). Lysozyme gene expression and hemocytes behaviour in the Mediterranean mussel, Mytilus galloprovincialis, after injection of various bacteria or temperature stresses. Fish Shellfish Immunology 25:143-152.

Löfgren S.E., Miletti L.C., Steindel M., Bachère E., Barracco M.A. (2008). Trypanocidal and leishmanicidal activities of different antimicrobial peptides (AMPs) isolated from aquatic animals. Experimental Parasitologie 118(2):197-202.

Mas S., Roy S., Blouin F., Mostajir B., Therriault J.-C., Nozais C., Demers S. (2008). Diel variations in optical properties of Imantonia rotunda (Haptophyceae) and Thalassiosira pseudonana (Bacillariophyceae) exposed to different irradiance levels. Journal of Phycology, 44: 551-563.

Mason N.W.H., Irz P., Lanoiselée C., Mouillot D., Argillier C. (2008). Evidence that niche specialization explains species-energy relationships in lake fish communities. Journal of Animal Ecology 77: 285-296.

Mason N.W.H., Lanoiselée C., Mouillot D., Wilson J.B., Argillier C. (2008). Does niche overlap control relative abundance in French lacustrine fish communities? A new method incorporating functional traits. Journal of Animal Ecology 77: 661-669.

Masseret E., Sukenik A. (2008). Amplified rDNA Restriction Analysis (ARDRA) for monitoring of potentially toxic cyanobacteria in water samples. Israel Journal of Plant Science 56: 77-84.

Mendoza-Vera M., Kâ S., Cuoc C., Bouvy M., Pagano M. (2008). Decline of Pseudodiaptomus hessei (Copepoda, Calanoida) in two water bodies located in the Senegal River hydrosystem (West Africa): hypotheses and perspectives. Estuarine Coastal and Shelf Science 79: 740-750.

Mouchet M., Guilhaumon F., Villeger S., Mason N.W.H., Tomasini J.A., Mouillot D. (2008). Towards a consensus for calculating dendrogram-based functional diversity indices. Oikos 117: 794-800.

Mouillot D., Culioli J.M., Pelletier D., Tomasini J.A. (2008). Do we protect biological originality in protected areas? A new index and an application to the Bonifacio Strait Natural Reserve. Biological Conservation 141: 1569-1580.

Mouillot D., Krasnov B.R., Poulin R. (2008). High ant intervality explained by phylogenetic constraints in host-parasite webs. Ecology 89: 2043-2051.

Mouillot D., Krasnov B.R., Shenbrot G.I., Poulin R. (2008) Connectance and parasite diet breadth in flea-mammal webs. Ecography 31: 16-20.

Mounier J., Monnet C., Vallaeys T., Arditi R., Sarthou A.S., Hélias A., Irlinger F. (2008). Microbial interactions within a cheese microbial community. Applied Environmental Microbiology 74:172-181.

Nebel C., Romestand B., Negre-Sadargues G., Aujoulat F., Grousset E., Bacal J., Bonhomme F., Charmantier G. (2008) Differential freshwater adaptation in juvenile sea-bass Dicentrarchus labrax: histophysiological basis at the gill and urinary system levels. Journal of Experimental Biology. 208: 3859-3871.

Nogaro G., Charles F., Braga De Mendonca Jr J., Stora G., François-Carcaillet F. (2008).  Food supply impacts sediment reworking by Nereis diversicolor. Hydrobiologia 598: 403-408.

Parisi M-G., Li H., Jouvet LBP., Dyrynda E.A., Parrinello N., Cammarata M., Roch Ph. (2008). Differential involvement of mussel hemocyte sub-populations in the clearance of bacteria. Fish and Shellfish Immunology 2008: 834-840.

Poulin R., Luque J.L., Guilhaumon F., Mouillot D. (2008). Species abundance distributions and numerical dominance in gastrointestinal helminth communities of fish hosts. Journal of Helminthology 82: 193-202.

Pringault O., Duran R., Jacquet S., Torréton JP. (2008). Temporal variations of microbial activity and diversity in marine tropical sediments. Microbial Ecology, 55:247-258.

Quiblier C., Leboulanger C., Sané S., Dufour D. (2008). Phytoplankton growth control and risk of cyanobacterial blooms in the lower Senegal River delta region. Water Research 42: 1023-1034.

Ramos Miranda J., Mouillot D., Sosa Lopez A., Do Chi T., Flores Hernandez D. (2008). How much variation can be explained by seasonal, spatial and environmental effects in nekton assemblages of the Terminos lagoon? Aquatic Conservation 18: 508-517.

Rigal F., Chevalier T., Lorin-Nebel C., Charmantier G., Tomasini J.A., Aujoulat F., Berrebi P. (2008). Osmoregulation as a potential factor for the differential distribution of the cryptic gobiids, Pomatoschistus microps and P. marmoratus in French Mediterranean lagoons. Scientia Marina 72(3): 469-476.

Roberts S., Gueguen Y., de Lorgeril J., Goetz F. (2008). Rapid accumulation of an interleukin 17 homolog transcript in Crassostrea gigas hemocytes following bacterial exposure. Developmental & Comparative Immunology  32(9): 1099-104.

Roch Ph., Yang YS., Toubiana M., Aumelas A. (2008). NMR structure of mussel mytilin, and antiviral-antibacterial activities of derived synthetic peptides.  Developmental and Comparative Immunology 32:227-238.

Rochelle-Newall E., Mari X., Rouchon C., Torréton J-P., Pringault O. (2008). Zinc induces shifts in microbial carbon flux. Aquatic Microbial Ecology 52:57-68.

Rochelle-Newall EJ., Torréton J-P., Mari X., Pringault O. (2008). Phytoplankton-bacterioplankton coupling in a sub-tropical South Pacific coral reef lagoon. Aquatic Microbial Ecology 50: 221-229.

Sakka Hlaili A., Boutheina Grami B., Niquil N., Gosselin M. , Hamel D., Troussellier M., Hadj Mabrouk H. (2008). The planktonic food web of the Bizerte lagoon (south-western Mediterranean) during summer: I. Spatial distribution under different anthropogenic pressures.  Estuarine and Coastal Shelf Science 78 : 61-77.

Somboonwiwat K., Bachère E., Rimphanitchayakit V., Tassanakajon A. (2008). Localization of anti-lipopolysaccharide factor (ALFPm3) in tissues of the black tiger shrimp, Penaeus monodon, and characterization of its binding properties. Developmental & Comparative Immunology 32(10):1170-6.

Spatharis S., Mouillot D., Tsirtsis G., Karydis M., Do Chi T., Danielidis D. (2008). Influence of terrestrial runoff on phytoplankton species richness-biomass relationships: A double stress hypothesis. Journal of Experimental Marine Biology and Ecology 362: 55-62.

Tanguy A., Bierne N., Saavedra C., Pina B., Bachère E., Kube M., Bazin E., Bonhomme F., Boudry P., Boulo V., Boutet I., Cancela L., Dossat C., Favrel P., Huvet A., Jarque S., Jollivet D., Klages S., Lapègue S., Leite R., Moal J., Moraga D., Reinhardt R., Samain J.F., Zouros E., Canario A. (2008). Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution. Gene 408: 27-36.

Venail P.A., MacLean R.C., Bouvier T., Brockhurst M.A., Hochberg M.E., Mouquet N. (2008). Functional diversity and productivity peak at intermediate levels of dispersal in evolving metacommunities. Nature 452: 210-214.

Villeger S., Mason N., Mouillot D. (2008). New multidimensional functional diversity indices for a multifaceted framework in functional ecology. Ecology 89: 2290-2301.

Villeger S., Mouillot D. (2008). Additive partitioning of diversity including species differences: a comment on Hardy & Senterre (2007). Journal of Ecology. 96: 845-848.

Villeger S., Ramos Miranda J., Flores Hernandez D., Sosa Lopez A., Mouillot D. (2008). Stable trophic structure across coastal nekton assemblages despite high species turnover. Marine Ecology Progress Series 364: 135-146.

Zeman F.A., Gilbin R., Alonzo F., Pradines C., Garnier-Laplace J., Aliaume C. (2008). Effects of waterborne uranium on survival, growth, reproduction and physiological processes of the freshwater cladoceran Daphnia magna. Aquatic Toxicology 86: 370-378.



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